SECompartmentNodes< COMPARTMENT_NODE_TEMPLATE > Class Template Reference

#include <SECompartmentNodes.h>

Inherits Loggable.

Public Member Functions
	SECompartmentNodes (Logger *logger)
virtual	~SECompartmentNodes ()
virtual void	Clear ()
virtual void	StateChange ()
virtual bool	HasMapping () const
virtual bool	HasMapping (const NodeType &n) const
virtual const std::vector< NodeType * > &	GetNodes () const
virtual const std::vector< NodeType * > &	GetQuantityNodes () const
virtual void	RemoveNode (NodeType &node)
virtual void	MapNode (NodeType &node)
virtual bool	HasQuantity () const
virtual QuantityScalar &	GetQuantity ()
virtual double	GetQuantity (const QuantityUnit &unit) const
virtual bool	HasPotential () const
virtual PotentialScalar &	GetPotential ()
virtual double	GetPotential (const PotentialUnit &unit) const
Public Member Functions inherited from Loggable
	Loggable (Logger *logger=nullptr)
	Loggable (std::string const &logfile)
virtual	~Loggable ()
virtual Logger *	GetLogger () const
virtual void	SetLogger (Logger &logger)
virtual void	Debug (std::string const &msg) const
virtual void	Debug (std::stringstream &msg) const
virtual void	Debug (std::ostream &msg) const
virtual void	Info (std::string const &msg) const
virtual void	Info (std::stringstream &msg) const
virtual void	Info (const std::stringstream &msg) const
virtual void	Info (std::ostream &msg) const
virtual void	Warning (std::string const &msg) const
virtual void	Warning (std::stringstream &msg) const
virtual void	Warning (std::ostream &msg) const
virtual void	Error (std::string const &msg) const
virtual void	Error (std::stringstream &msg) const
virtual void	Error (std::ostream &msg) const
virtual void	Fatal (std::string const &msg) const
virtual void	Fatal (std::stringstream &msg) const
virtual void	Fatal (std::ostream &msg) const

Protected Member Functions
void	SortNode (NodeType &node)

Protected Attributes
std::vector< NodeType * >	m_QuantityNodes
std::vector< NodeType * >	m_AllNodes
QuantityScalar *	m_Quantity
PotentialScalar *	m_Potential
Protected Attributes inherited from Loggable
bool	myLogger
Logger *	m_Logger

Friends
class	PBCompartment

Constructor & Destructor Documentation

SECompartmentNodes()

template<COMPARTMENT_NODE_TEMPLATE >

SECompartmentNodes< COMPARTMENT_NODE_TEMPLATE >::SECompartmentNodes

(

Logger *

logger

)

~SECompartmentNodes()

template<COMPARTMENT_NODE_TEMPLATE >

SECompartmentNodes< COMPARTMENT_NODE_TEMPLATE >::~SECompartmentNodes

virtual

Member Function Documentation

Clear()

template<COMPARTMENT_NODE_TEMPLATE >

void SECompartmentNodes< COMPARTMENT_NODE_TEMPLATE >::Clear

virtual

GetNodes()

template<COMPARTMENT_NODE_TEMPLATE >

virtual const std::vector< NodeType * > & SECompartmentNodes< COMPARTMENT_NODE_TEMPLATE >::GetNodes ( ) const

inlinevirtual

GetPotential() [1/2]

template<COMPARTMENT_NODE_TEMPLATE >

PotentialScalar & SECompartmentNodes< COMPARTMENT_NODE_TEMPLATE >::GetPotential

virtual

GetPotential() [2/2]

template<COMPARTMENT_NODE_TEMPLATE >

double SECompartmentNodes< COMPARTMENT_NODE_TEMPLATE >::GetPotential ( const PotentialUnit &  unit ) const

virtual

GetQuantity() [1/2]

template<COMPARTMENT_NODE_TEMPLATE >

QuantityScalar & SECompartmentNodes< COMPARTMENT_NODE_TEMPLATE >::GetQuantity

virtual

GetQuantity() [2/2]

template<COMPARTMENT_NODE_TEMPLATE >

double SECompartmentNodes< COMPARTMENT_NODE_TEMPLATE >::GetQuantity ( const QuantityUnit &  unit ) const

virtual

GetQuantityNodes()

template<COMPARTMENT_NODE_TEMPLATE >

virtual const std::vector< NodeType * > & SECompartmentNodes< COMPARTMENT_NODE_TEMPLATE >::GetQuantityNodes ( ) const

inlinevirtual

HasMapping() [1/2]

template<COMPARTMENT_NODE_TEMPLATE >

virtual bool SECompartmentNodes< COMPARTMENT_NODE_TEMPLATE >::HasMapping ( ) const

inlinevirtual

HasMapping() [2/2]

template<COMPARTMENT_NODE_TEMPLATE >

virtual bool SECompartmentNodes< COMPARTMENT_NODE_TEMPLATE >::HasMapping ( const NodeType &  n ) const

inlinevirtual

HasPotential()

template<COMPARTMENT_NODE_TEMPLATE >

bool SECompartmentNodes< COMPARTMENT_NODE_TEMPLATE >::HasPotential

virtual

HasQuantity()

template<COMPARTMENT_NODE_TEMPLATE >

virtual bool SECompartmentNodes< COMPARTMENT_NODE_TEMPLATE >::HasQuantity ( ) const

inlinevirtual

MapNode()

template<COMPARTMENT_NODE_TEMPLATE >

void SECompartmentNodes< COMPARTMENT_NODE_TEMPLATE >::MapNode ( NodeType &  node )

virtual

RemoveNode()

template<COMPARTMENT_NODE_TEMPLATE >

void SECompartmentNodes< COMPARTMENT_NODE_TEMPLATE >::RemoveNode ( NodeType &  node )

virtual

SortNode()

template<COMPARTMENT_NODE_TEMPLATE >

void SECompartmentNodes< COMPARTMENT_NODE_TEMPLATE >::SortNode ( NodeType &  node )

protected

StateChange()

template<COMPARTMENT_NODE_TEMPLATE >

void SECompartmentNodes< COMPARTMENT_NODE_TEMPLATE >::StateChange

virtual

Friends And Related Function Documentation

PBCompartment

template<COMPARTMENT_NODE_TEMPLATE >

friend class PBCompartment

friend

Member Data Documentation

m_AllNodes

template<COMPARTMENT_NODE_TEMPLATE >

std::vector<NodeType*> SECompartmentNodes< COMPARTMENT_NODE_TEMPLATE >::m_AllNodes

protected

m_Potential

template<COMPARTMENT_NODE_TEMPLATE >

PotentialScalar* SECompartmentNodes< COMPARTMENT_NODE_TEMPLATE >::m_Potential

protected

m_Quantity

template<COMPARTMENT_NODE_TEMPLATE >

QuantityScalar* SECompartmentNodes< COMPARTMENT_NODE_TEMPLATE >::m_Quantity

protected

m_QuantityNodes

template<COMPARTMENT_NODE_TEMPLATE >

std::vector<NodeType*> SECompartmentNodes< COMPARTMENT_NODE_TEMPLATE >::m_QuantityNodes

protected